BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A06SP1|AL426135
(759 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1788 1505 0.0
>3x_Contig1788
Length = 28493
Score = 1505 bits (759), Expect = 0.0
Identities = 759/759 (100%)
Strand = Plus / Minus
Query: 1 agatcttgatgtgtaatgtgttcgaactgattgacaaattcaggagtatcaggtttactt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20878 agatcttgatgtgtaatgtgttcgaactgattgacaaattcaggagtatcaggtttactt 20819
Query: 61 gatacatttttggcggaagattcgacttgttcatgcttttcatcctccgaagaaacttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20818 gatacatttttggcggaagattcgacttgttcatgcttttcatcctccgaagaaacttga 20759
Query: 121 gtgtcttcaagtttgagatcttggatggcaggaatatcgatttcagcgccctgggcatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20758 gtgtcttcaagtttgagatcttggatggcaggaatatcgatttcagcgccctgggcatct 20699
Query: 181 gacactttatcttgtgtctctaaaattggtgtcttcttgatcgagtcagcatcggaatct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20698 gacactttatcttgtgtctctaaaattggtgtcttcttgatcgagtcagcatcggaatct 20639
Query: 241 gatatttgatccttttctaacgtagaaccagtagaccatccacctggtaatggttcatca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20638 gatatttgatccttttctaacgtagaaccagtagaccatccacctggtaatggttcatca 20579
Query: 301 gtagaagctggttgtacagtttcactcccttgtttagtaatatcattgttttcagcatct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20578 gtagaagctggttgtacagtttcactcccttgtttagtaatatcattgttttcagcatct 20519
Query: 361 tccagctgttgatcaatgtctaggacagcgttttcctttggctcactctcgacttcgtct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20518 tccagctgttgatcaatgtctaggacagcgttttcctttggctcactctcgacttcgtct 20459
Query: 421 ctaactgattgaggtggattgttggctgtcgacgatgtgacagattctgttctagggatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20458 ctaactgattgaggtggattgttggctgtcgacgatgtgacagattctgttctagggatg 20399
Query: 481 ccgtattcgtttaaacttccttcgaaagaatctgccatcgcttcggcagcaacttcatca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20398 ccgtattcgtttaaacttccttcgaaagaatctgccatcgcttcggcagcaacttcatca 20339
Query: 541 ttaccctgctggtcatgtaattgctgctcgcttaattgatcatcttctaattgttgattt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20338 ttaccctgctggtcatgtaattgctgctcgcttaattgatcatcttctaattgttgattt 20279
Query: 601 tgttcttcgtcaggttcagtttgtgagacaggagttggaacatctttgtcgaaaacactt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20278 tgttcttcgtcaggttcagtttgtgagacaggagttggaacatctttgtcgaaaacactt 20219
Query: 661 tctggtttttcctcctcctcagctggctgggcagtctgaatttgcagtcttttttgaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20218 tctggtttttcctcctcctcagctggctgggcagtctgaatttgcagtcttttttgaatc 20159
Query: 721 aattcgtttgtatactcatcatcaggggtttctcccatg 759
|||||||||||||||||||||||||||||||||||||||
Sbjct: 20158 aattcgtttgtatactcatcatcaggggtttctcccatg 20120
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6032
Number of Sequences: 1807
Number of extensions: 6032
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 759
length of database: 10,358,551
effective HSP length: 16
effective length of query: 743
effective length of database: 10,329,639
effective search space: 7674921777
effective search space used: 7674921777
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)